NAME
Version - Tree reconstrucion
SYNOPSIS
tree_recon -m <Phylip distance matrix> [Options]
DESCRIPTION
Tree reconstrucion - TreeRecon
-h, --help
displays this help message
-V, --version
print version information
Main Options:
-m, --matrix <Phylip distance matrix>
file with distance matrix At least 3 species required.
-b, --build [nj, min, max, avg, wavg]
tree building method (default nj)
nj = Neighbor-joining
min = UPGMA single linkage
max = UPGMA complete linkage
avg = UPGMA average linkage
wavg = UPGMA weighted average linkage
Neighbor-joining creates an unrooted tree. We root that tree at
the last joined pair.
-o, --outfile <Filename>
output filename (default tree.dot)
-f, --format [dot | newick]
output format (default dot)
AUTHOR
tree_recon was written by Tobias Rausch.
This manual page was generated using html2man and polished by Soeren
Sonnenburg <sonne@debian.org>, for the Debian project (but may be used
by others).
Version 1.01 (18. August 2009) RSeptember42009 VERSION(1)