NAME
lastdb - genome-scale comparison of biological sequences
SYNOPSIS
lastdb [options] output-name fasta-sequence-file(s)
DESCRIPTION
Prepare sequences for subsequent alignment with lastal.
Main Options: -h: show all options and their default settings -p:
interpret the sequences as proteins -c: soft-mask lowercase letters -m:
spaced seed pattern
Advanced Options (default settings): -s: volume size (1280 MiB) -w:
index step (1) -u: subset seed file -a: user-defined alphabet -b:
bucket depth -v: be verbose: write messages about what lastdb is doing
REPORTING BUGS
Report bugs to: last (ATmark) cbrc (dot) jp
LAST home page: http://last.cbrc.jp/