NAME
dsr2html - Render DICOM SR file and data set to HTML
SYNOPSIS
dsr2html [options] dsrfile-in [htmlfile-out]
DESCRIPTION
The dsr2html utility renders the contents of a DICOM Structured
Reporting (SR) document (file format or raw data set) to HTML (Hyper
Text Markup Language) which is compatible with version 3.2 or 4.0.
If dsr2html reads a raw data set (DICOM data without a file format
meta-header) it will attempt to guess the transfer syntax by examining
the first few bytes of the file. It is not always possible to correctly
guess the transfer syntax and it is better to convert a data set to a
file format whenever possible (using the dcmconv utility). It is also
possible to use the -f and -t[ieb] options to force dsr2html to read a
dataset with a particular transfer syntax.
PARAMETERS
dsrfile-in DICOM SR input filename to be rendered
htmlfile-out HTML output filename (default: stdout)
OPTIONS
general options
-h --help
print this help text and exit
--version
print version information and exit
-d --debug
debug mode, print debug information
-dd --verbose-debug
verbose debug mode, print more details
input options
input file format:
+f --read-file
read file format or data set (default)
+fo --read-file-only
read file format only
-f --read-dataset
read data set without file meta information
input transfer syntax:
-t= --read-xfer-auto
use TS recognition (default)
-td --read-xfer-detect
ignore TS specified in the file meta header
-te --read-xfer-little
read with explicit VR little endian TS
-tb --read-xfer-big
read with explicit VR big endian TS
-ti --read-xfer-implicit
read with implicit VR little endian TS
parsing options
additional information:
-Ip --processing-details
show currently processed content item
error handling:
-Ec --ignore-constraints
ignore relationship content constraints
-Ee --ignore-item-errors
do not abort on content item errors, just warn
(e.g. missing value type specific attributes)
-Ei --skip-invalid-items
skip invalid content items (incl. sub-tree)
character set:
+Cr --charset-require
require declaration of extended charset (default)
+Ca --charset-assume charset: string constant
(latin-1 to -5, greek, cyrillic, arabic, hebrew)
assume charset if undeclared ext. charset found
output options
HTML compatibility:
+H3 --html-3.2
use only HTML version 3.2 compatible features
+H4 --html-4.0
allow all HTML version 4.0 features (default)
+Hd --add-document-type
add reference to SGML document type definition
cascading style sheet (CSS), only with HTML 4.0:
+Sr --css-reference URL : string
add reference to specified CSS to HTML page
+Sf --css-file filename : string
embed content of specified CSS into HTML page
general rendering:
+Ri --expand-inline
expand short content items inline (default)
-Ri --never-expand-inline
never expand content items inline
+Rd --render-full-data
render full data of content items
document rendering:
+Dt --document-type-title
use document type as document title (default)
+Dp --patient-info-title
use patient information as document title
-Dh --no-document-header
do not render general document information
code rendering:
+Ci --render-inline-codes
render codes in continuous text blocks
+Cn --concept-name-codes
render code of concept names
+Cu --numeric-unit-codes
render code of numeric measurement units
+Cv --code-value-unit
use code value as measurement unit (default)
+Cm --code-meaning-unit
use code meaning as measurement unit
+Ca --render-all-codes
render all codes (implies +Ci, +Cn and +Cu)
NOTES
DICOM Conformance
The dsr2html utility supports the following SOP Classes (according to
DICOM 2004 and Supplement 94):
BasicTextSR 1.2.840.10008.5.1.4.1.1.88.11
EnhancedSR 1.2.840.10008.5.1.4.1.1.88.22
ComprehensiveSR 1.2.840.10008.5.1.4.1.1.88.33
ProcedureLog 1.2.840.10008.5.1.4.1.1.88.40
MammographyCADSR 1.2.840.10008.5.1.4.1.1.88.50
KeyObjectSelectionDocument 1.2.840.10008.5.1.4.1.1.88.59
ChestCADSR 1.2.840.10008.5.1.4.1.1.88.65
XRayRadiationDoseSR 1.2.840.10008.5.1.4.1.1.88.67
COMMAND LINE
All command line tools use the following notation for parameters:
square brackets enclose optional values (0-1), three trailing dots
indicate that multiple values are allowed (1-n), a combination of both
means 0 to n values.
Command line options are distinguished from parameters by a leading ’+’
or ’-’ sign, respectively. Usually, order and position of command line
options are arbitrary (i.e. they can appear anywhere). However, if
options are mutually exclusive the rightmost appearance is used. This
behaviour conforms to the standard evaluation rules of common Unix
shells.
In addition, one or more command files can be specified using an ’@’
sign as a prefix to the filename (e.g. @command.txt). Such a command
argument is replaced by the content of the corresponding text file
(multiple whitespaces are treated as a single separator) prior to any
further evaluation. Please note that a command file cannot contain
another command file. This simple but effective approach allows to
summarize common combinations of options/parameters and avoids longish
and confusing command lines (an example is provided in file
share/data/dumppat.txt).
ENVIRONMENT
The dsr2html utility will attempt to load DICOM data dictionaries
specified in the DCMDICTPATH environment variable. By default, i.e. if
the DCMDICTPATH environment variable is not set, the file
<PREFIX>/lib/dicom.dic will be loaded unless the dictionary is built
into the application (default for Windows).
The default behaviour should be preferred and the DCMDICTPATH
environment variable only used when alternative data dictionaries are
required. The DCMDICTPATH environment variable has the same format as
the Unix shell PATH variable in that a colon (’:’) separates entries.
The data dictionary code will attempt to load each file specified in
the DCMDICTPATH environment variable. It is an error if no data
dictionary can be loaded.
SEE ALSO
dcmconv(1)
COPYRIGHT
Copyright (C) 2000-2005 by Kuratorium OFFIS e.V., Escherweg 2, 26121
Oldenburg, Germany.