NAME
br_biofetch.rb — biofetch client
SYNOPSIS
br_biofetch.rb [-s server] [db] [id] [style] [format]
DESCRIPTION
This manual page documents briefly the br_biofetch.rb.
br_biofetch.rb is a very simple biofetch client. You can connect to a
biofetch server and retrieve database entries including sequence
information.
OPTIONS
-s Specify the URL of the BioFetch CGI (default is
http://bioruby.org/cgi-bin/biofetch.rb)
-e Use the EBI server at http://www.ebi.ac.uk/cgi-bin/dbfetch
-r Use the BioRuby server at http://bioruby.org/cgi-
bin/biofetch.rb
db Database name. This includes options like refseq, genbank,
embl, swissprot, etc. This option depends on which biofetch
server you are using.
id entry id
style ´raw´ or ´html´ (default is ´raw´)
format Output format (’default, ’fasta’, ’etc’)
SEE ALSO
bar (1), baz (1).
AUTHOR
This manual page was written by David Nusinow dnusinow@debian.org for
the Debian system (but may be used by others). Permission is granted
to copy, distribute and/or modify this document under the terms of the
GNU General Public License, Version 2 any later version published by
the Free Software Foundation.
On Debian systems, the complete text of the GNU General Public License
can be found in /usr/share/common-licenses/GPL.
BIORUBY(1)