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NAME

       g_rama - computes Ramachandran plots

       VERSION 4.0.1

SYNOPSIS

       g_rama -f traj.xtc -s topol.tpr -o rama.xvg -[no]h -nice int -b time -e
       time -dt time -[no]w -[no]xvgr

DESCRIPTION

       g_rama selects the Phi/Psi dihedral  combinations  from  your  topology
       file and computes these as a function of time.  Using simple Unix tools
       such as  grep you can select out specific residues.

FILES

       -f traj.xtc Input
        Trajectory: xtc trr trj gro g96 pdb cpt

       -s topol.tpr Input
        Run input file: tpr tpb tpa

       -o rama.xvg Output
        xvgr/xmgr file

OTHER OPTIONS

       -[no]hno
        Print help info and quit

       -nice int 19
        Set the nicelevel

       -b time 0
        First frame (ps) to read from trajectory

       -e time 0
        Last frame (ps) to read from trajectory

       -dt time 0
        Only use frame when t MOD dt = first time (ps)

       -[no]wno
        View output xvg, xpm, eps and pdb files

       -[no]xvgryes
        Add specific codes (legends etc.) in the  output  xvg  files  for  the
       xmgrace program

SEE ALSO

       gromacs(7)

       More      information     about     GROMACS     is     available     at
       <http://www.gromacs.org/>.

                                Thu 16 Oct 2008                      g_rama(1)