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NAME

       br_biofetch.rb — biofetch client

SYNOPSIS

       br_biofetch.rb [-s server]  [db]  [id]  [style]  [format]

DESCRIPTION

       This manual page documents briefly the br_biofetch.rb.

       br_biofetch.rb  is  a very simple biofetch client. You can connect to a
       biofetch  server  and  retrieve  database  entries  including  sequence
       information.

OPTIONS

       -s        Specify   the   URL   of   the   BioFetch   CGI  (default  is
                 http://bioruby.org/cgi-bin/biofetch.rb)

       -e        Use the EBI server at http://www.ebi.ac.uk/cgi-bin/dbfetch

       -r        Use   the   BioRuby   server    at    http://bioruby.org/cgi-
                 bin/biofetch.rb

       db        Database  name.  This  includes options like refseq, genbank,
                 embl, swissprot, etc. This option depends on  which  biofetch
                 server you are using.

       id        entry id

       style     ´raw´ or ´html´ (default is ´raw´)

       format    Output format (’default, ’fasta’, ’etc’)

SEE ALSO

       bar (1), baz (1).

AUTHOR

       This  manual  page was written by David Nusinow dnusinow@debian.org for
       the Debian system (but may be used by others).  Permission  is  granted
       to  copy, distribute and/or modify this document under the terms of the
       GNU General Public License, Version 2 any later  version  published  by
       the Free Software Foundation.

       On  Debian systems, the complete text of the GNU General Public License
       can be found in /usr/share/common-licenses/GPL.

                                                                    BIORUBY(1)